Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SSNA1O43805 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SSNA1O43805 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
SSNA1O43805 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.11■□□□□ 0.33
SSNA1O43805 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.11■□□□□ 0.33
SSNA1O43805 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.11■□□□□ 0.33
SSNA1O43805 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SSNA1O43805 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.11■□□□□ 0.33
SSNA1O43805 Z92544.1-202ENST00000571933 1220 ntBASIC17.11■□□□□ 0.33
SSNA1O43805 AL451085.2-201ENST00000605085 799 ntBASIC17.11■□□□□ 0.33
SSNA1O43805 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSNA1O43805 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SSNA1O43805 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SSNA1O43805 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SSNA1O43805 AP006587.3-201ENST00000525742 1516 ntBASIC17.11■□□□□ 0.33
SSNA1O43805 AC133637.1-201ENST00000624115 1537 ntBASIC17.11■□□□□ 0.33
SSNA1O43805 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.1■□□□□ 0.33
SSNA1O43805 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSNA1O43805 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 AC010141.3-201ENST00000456659 717 ntBASIC17.1■□□□□ 0.33
SSNA1O43805 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.1■□□□□ 0.33
SSNA1O43805 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.1■□□□□ 0.33
SSNA1O43805 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSNA1O43805 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SSNA1O43805 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
SSNA1O43805 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SSNA1O43805 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSNA1O43805 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.09■□□□□ 0.33
SSNA1O43805 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.09■□□□□ 0.33
SSNA1O43805 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.09■□□□□ 0.33
SSNA1O43805 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.09■□□□□ 0.33
SSNA1O43805 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SSNA1O43805 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.09■□□□□ 0.33
SSNA1O43805 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 AC011484.1-201ENST00000377652 1995 ntBASIC17.09■□□□□ 0.33
SSNA1O43805 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SSNA1O43805 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SSNA1O43805 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSNA1O43805 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SSNA1O43805 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSNA1O43805 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SSNA1O43805 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 TMEM179-206ENST00000616017 1645 ntBASIC17.08■□□□□ 0.32
SSNA1O43805 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SSNA1O43805 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.08■□□□□ 0.32
SSNA1O43805 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSNA1O43805 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.08■□□□□ 0.32
SSNA1O43805 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
SSNA1O43805 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms