Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2A1O14983 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 PLK5-205ENST00000642079 1969 ntBASIC23.07■■□□□ 1.28
ATP2A1O14983 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2A1O14983 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2A1O14983 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2A1O14983 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2A1O14983 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
ATP2A1O14983 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP2A1O14983 BX088651.1-201ENST00000540551 451 ntBASIC23.06■■□□□ 1.28
ATP2A1O14983 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP2A1O14983 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2A1O14983 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2A1O14983 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.06■■□□□ 1.28
ATP2A1O14983 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2A1O14983 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.06■■□□□ 1.28
ATP2A1O14983 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2A1O14983 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 HLA-G-202ENST00000376815 851 ntBASIC23.05■■□□□ 1.28
ATP2A1O14983 HLA-G-203ENST00000376818 1127 ntBASIC23.05■■□□□ 1.28
ATP2A1O14983 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2A1O14983 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2A1O14983 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ATP2A1O14983 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
ATP2A1O14983 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
ATP2A1O14983 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2A1O14983 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2A1O14983 NBPF21P-201ENST00000425093 1451 ntBASIC23.05■■□□□ 1.28
ATP2A1O14983 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP2A1O14983 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP2A1O14983 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP2A1O14983 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.04■■□□□ 1.28
ATP2A1O14983 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.04■■□□□ 1.28
ATP2A1O14983 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2A1O14983 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ATP2A1O14983 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2A1O14983 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ATP2A1O14983 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP2A1O14983 AL031963.3-201ENST00000606441 850 ntBASIC23.03■■□□□ 1.28
ATP2A1O14983 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ATP2A1O14983 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2A1O14983 AL121603.2-201ENST00000557373 2117 ntBASIC23.03■■□□□ 1.28
ATP2A1O14983 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2A1O14983 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP2A1O14983 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ATP2A1O14983 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 KRT8P20-201ENST00000423953 1409 ntBASIC23.02■■□□□ 1.28
ATP2A1O14983 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ATP2A1O14983 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 AC211429.1-201ENST00000415277 523 ntBASIC23.02■■□□□ 1.28
ATP2A1O14983 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2A1O14983 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.02■■□□□ 1.28
ATP2A1O14983 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms