Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF223E7ERA6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF223E7ERA6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 AC113347.1-201ENST00000413321 391 ntBASIC16.69■□□□□ 0.26
RNF223E7ERA6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 AL390955.1-201ENST00000428694 934 ntBASIC16.69■□□□□ 0.26
RNF223E7ERA6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 NAPSB-206ENST00000562112 1266 ntBASIC16.69■□□□□ 0.26
RNF223E7ERA6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF223E7ERA6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF223E7ERA6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 AL137013.1-201ENST00000432946 1228 ntBASIC16.68■□□□□ 0.26
RNF223E7ERA6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 CR392000.1-201ENST00000624770 1228 ntBASIC16.68■□□□□ 0.26
RNF223E7ERA6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF223E7ERA6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF223E7ERA6 CLDN5-201ENST00000403084 2357 ntBASIC16.67■□□□□ 0.26
RNF223E7ERA6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 KRT18P22-201ENST00000402024 1347 ntBASIC16.67■□□□□ 0.26
RNF223E7ERA6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF223E7ERA6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF223E7ERA6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF223E7ERA6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms