Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 AC004854.2-201ENST00000608450 1441 ntBASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM49D1C9J1S8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 AC019069.1-201ENST00000610008 1333 ntBASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 AC123595.1-201ENST00000440769 1046 ntBASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 AC005837.3-201ENST00000612163 286 ntBASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
TRIM49D1C9J1S8 TREX1-205ENST00000625293 1783 ntBASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM49D1C9J1S8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 AC005332.7-201ENST00000614046 2005 ntBASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM49D1C9J1S8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 CDV3P1-201ENST00000471403 739 ntBASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 AP000974.1-201ENST00000623909 2387 ntBASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM49D1C9J1S8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 AC093484.2-201ENST00000580996 2166 ntBASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM49D1C9J1S8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM49D1C9J1S8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms