Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 LSM12P1-201ENST00000411836 588 ntBASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AC083906.2-201ENST00000511578 360 ntBASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AL121832.2-201ENST00000610979 668 ntBASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
TRIM6-TRIM34B2RNG4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 BX276092.2-201ENST00000417668 665 ntBASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRIM6-TRIM34B2RNG4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 AFG3L1P-217ENST00000557444 2447 ntBASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRIM6-TRIM34B2RNG4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms