Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HMX3A6NHT5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
HMX3A6NHT5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 SRD5A1P1-201ENST00000442297 786 ntBASIC17.36■□□□□ 0.37
HMX3A6NHT5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 AL512631.2-201ENST00000604634 923 ntBASIC17.36■□□□□ 0.37
HMX3A6NHT5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 AL133373.2-201ENST00000623187 2828 ntBASIC17.36■□□□□ 0.37
HMX3A6NHT5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 AC133637.1-201ENST00000624115 1537 ntBASIC17.36■□□□□ 0.37
HMX3A6NHT5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HMX3A6NHT5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.36■□□□□ 0.37
HMX3A6NHT5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 AC020763.4-201ENST00000623414 4170 ntBASIC17.35■□□□□ 0.37
HMX3A6NHT5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HMX3A6NHT5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.35■□□□□ 0.37
HMX3A6NHT5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.34■□□□□ 0.37
HMX3A6NHT5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HMX3A6NHT5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms