Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.2□□□□□ -0.14
LINC01546A6NGU7 TSPY9P-201ENST00000440215 945 ntBASIC14.2□□□□□ -0.14
LINC01546A6NGU7 TSPY11P-201ENST00000442607 1045 ntBASIC14.2□□□□□ -0.14
LINC01546A6NGU7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
LINC01546A6NGU7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 AP000997.3-201ENST00000623333 2250 ntBASIC14.19□□□□□ -0.14
LINC01546A6NGU7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01546A6NGU7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 AC090164.3-201ENST00000610780 2143 ntBASIC14.18□□□□□ -0.14
LINC01546A6NGU7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 PCDHB18P-201ENST00000524813 2368 ntBASIC14.18□□□□□ -0.14
LINC01546A6NGU7 BICD1-207ENST00000551848 1962 ntBASIC14.18□□□□□ -0.14
LINC01546A6NGU7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 POU5F1P4-201ENST00000413175 1085 ntBASIC14.18□□□□□ -0.14
LINC01546A6NGU7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 NOC2LP1-202ENST00000452600 2235 ntBASIC14.18□□□□□ -0.14
LINC01546A6NGU7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01546A6NGU7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 AC245052.3-201ENST00000450182 901 ntBASIC14.17□□□□□ -0.14
LINC01546A6NGU7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC01546A6NGU7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms