Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 AL390961.4-201ENST00000623958 2535 ntBASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 AL691432.2-201ENST00000607222 2038 ntBASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.85■□□□□ 0.13
RBFOX3A6NFN3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RBFOX3A6NFN3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RBFOX3A6NFN3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RBFOX3A6NFN3 AL032819.2-201ENST00000624543 2162 ntBASIC15.83■□□□□ 0.13
RBFOX3A6NFN3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RBFOX3A6NFN3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RBFOX3A6NFN3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 AC137630.3-201ENST00000607245 391 ntBASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.83■□□□□ 0.12
RBFOX3A6NFN3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RBFOX3A6NFN3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms