Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AL162377.1-201ENST00000618844 1793 ntBASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AL355472.2-201ENST00000422958 438 ntBASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC007322.3-201ENST00000426526 701 ntBASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AL512408.1-201ENST00000569378 2000 ntBASIC16.11■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 POU5F1P3-201ENST00000428824 1078 ntBASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.1■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 KRT18P29-201ENST00000397031 1267 ntBASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC083880.1-201ENST00000608266 535 ntBASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 AC100791.3-201ENST00000617619 330 ntBASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 RNF165-205ENST00000588679 2904 ntBASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PCDHAC2-203ENST00000615316 3011 ntBASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
TCRBV4S1A1TA0A5B7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TCRBV4S1A1TA0A5B7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.08■□□□□ 0.17
TCRBV4S1A1TA0A5B7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TCRBV4S1A1TA0A5B7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.08■□□□□ 0.16
TCRBV4S1A1TA0A5B7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms