Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC110285.6-201ENST00000617652 491 ntBASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 AC005332.7-201ENST00000614046 2005 ntBASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV5A0A0B4J249 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 BX119927.1-201ENST00000636596 1552 ntBASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV5A0A0B4J249 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 AC093484.2-201ENST00000580996 2166 ntBASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 AL358852.1-201ENST00000623174 1268 ntBASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV5A0A0B4J249 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 TNXA-203ENST00000507684 2038 ntBASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV5A0A0B4J249 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV5A0A0B4J249 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms