Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 BX323043.1-201ENST00000641006 1765 ntBASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L2-201ENST00000561772 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L6-201ENST00000626483 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L1-201ENST00000627662 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L8-201ENST00000629013 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L3-201ENST00000630187 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L7-201ENST00000630678 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 DUX4L5-201ENST00000630834 1275 ntBASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV8-4A0A0B4J246 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 AC121338.2-201ENST00000622535 1744 ntBASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 KRT18P20-201ENST00000548986 1279 ntBASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV8-4A0A0B4J246 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 AC245052.3-201ENST00000450182 901 ntBASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 AC010141.2-201ENST00000452426 721 ntBASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 TERF1P2-201ENST00000583350 1212 ntBASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 AC006128.1-201ENST00000624704 1661 ntBASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 AC061975.6-201ENST00000579045 1553 ntBASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV8-4A0A0B4J246 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-4A0A0B4J246 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-4A0A0B4J246 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-4A0A0B4J246 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-4A0A0B4J246 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms