Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV2A0A0B4J234 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 AL355472.2-201ENST00000422958 438 ntBASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 TSPY6P-201ENST00000448518 926 ntBASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 MIR4758-201ENST00000577688 71 ntBASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV2A0A0B4J234 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 MIPEPP3-201ENST00000412105 444 ntBASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 BX276092.2-201ENST00000417668 665 ntBASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 AC090192.1-201ENST00000517740 490 ntBASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 C2orf69P4-201ENST00000565394 541 ntBASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV2A0A0B4J234 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 KRT17P1-201ENST00000399211 1546 ntBASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 LINC01521-201ENST00000504184 1943 ntBASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV2A0A0B4J234 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 HCG11-201ENST00000411553 5696 ntBASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV2A0A0B4J234 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms