Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AL133351.5-201ENST00000612789 106 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC010608.3-201ENST00000625048 527 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 TPK1-214ENST00000639328 826 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 AC012213.2-201ENST00000562917 4597 ntBASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.73□□□□□ -1.17
TRIM48Q8IWZ4 MTCO1P22-201ENST00000604619 1360 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 PHBP1-201ENST00000392260 808 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 PAICSP1-201ENST00000425324 1217 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 TRGV7-201ENST00000427089 353 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 PYHIN5P-201ENST00000431627 723 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 Z85994.2-201ENST00000434327 452 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC092106.1-201ENST00000444291 373 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 GTF2IP9-201ENST00000502460 301 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 NUTF2P2-201ENST00000551207 384 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC020910.4-201ENST00000612269 540 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 AC010320.5-201ENST00000619124 676 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 WASF4P-201ENST00000444248 1494 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 FMO9P-202ENST00000488458 1535 ntBASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.72□□□□□ -1.17
TRIM48Q8IWZ4 FBXO9-203ENST00000370939 1580 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 PRNCR1-201ENST00000635449 12727 ntBASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 Z82209.2-201ENST00000623410 2012 ntBASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 AC020895.2-201ENST00000624996 1839 ntBASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 ZNF887P-201ENST00000431363 1407 ntBASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM48Q8IWZ4 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM48Q8IWZ4 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
TRIM48Q8IWZ4 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM48Q8IWZ4 RNA5SP301-201ENST00000362537 121 ntBASIC7.71□□□□□ -1.18
TRIM48Q8IWZ4 RNU6-819P-201ENST00000364116 107 ntBASIC7.71□□□□□ -1.18
TRIM48Q8IWZ4 RNA5SP149-201ENST00000364952 92 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms