Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 AC000362.1-201ENST00000433725 425 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
UBE4BO95155 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE4BO95155 FUNDC2P2-202ENST00000443452 493 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE4BO95155 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.19□□□□□ -1.1
UBE4BO95155 TCEAL4P1-201ENST00000453620 588 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 GLRXP3-201ENST00000470810 321 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC8.19□□□□□ -1.1
UBE4BO95155 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE4BO95155 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.19□□□□□ -1.1
UBE4BO95155 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.19□□□□□ -1.1
UBE4BO95155 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
UBE4BO95155 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE4BO95155 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 AC110769.3-201ENST00000624567 1173 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 WNK1-220ENST00000574564 1401 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 MFSD8-218ENST00000641186 4448 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE4BO95155 DDX50P1-201ENST00000438163 2400 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE4BO95155 AL606490.2-201ENST00000457562 1330 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 TRIM64EP-201ENST00000531233 1307 ntBASIC8.19□□□□□ -1.1
UBE4BO95155 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE4BO95155 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 HYDIN2-203ENST00000614586 13885 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
UBE4BO95155 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE4BO95155 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE4BO95155 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE4BO95155 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE4BO95155 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE4BO95155 PTMAP8-201ENST00000397729 342 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 CNN3P1-201ENST00000401596 935 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 SOCS5P5-201ENST00000402732 1586 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 LSM5-202ENST00000409292 538 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE4BO95155 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 AC127537.1-201ENST00000418183 748 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC231533.2-201ENST00000419045 978 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 RPSAP62-201ENST00000432596 833 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AL451074.4-201ENST00000447545 470 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC097263.1-201ENST00000496795 606 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 AC013283.1-201ENST00000557282 492 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC006120.1-201ENST00000579375 546 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 OR7E94P-202ENST00000601375 790 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 RPS28P1-201ENST00000604589 187 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 OR6L2P-201ENST00000608207 925 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE4BO95155 BX005195.1-201ENST00000618097 1198 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC005785.2-201ENST00000624655 631 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.18□□□□□ -1.1
UBE4BO95155 AC018688.1-201ENST00000636528 1754 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE4BO95155 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
UBE4BO95155 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
UBE4BO95155 AC069222.1-201ENST00000608028 3360 ntBASIC8.18□□□□□ -1.1
UBE4BO95155 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE4BO95155 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.17□□□□□ -1.1
UBE4BO95155 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
UBE4BO95155 HDAC1P1-201ENST00000455482 1445 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 AL049869.1-201ENST00000556933 1402 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE4BO95155 AC008555.1-201ENST00000561778 2757 ntBASIC8.17□□□□□ -1.1
UBE4BO95155 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms