Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 GCNT6-201ENST00000379591 934 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 RPL5P35-201ENST00000398869 816 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CAPNS1P1-201ENST00000401029 633 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 RPSAP59-201ENST00000421048 890 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC130472.1-201ENST00000427885 309 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC099066.1-201ENST00000428148 534 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 Z98752.2-201ENST00000432727 312 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 Z80107.1-201ENST00000436830 412 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC092902.1-201ENST00000486999 259 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC093801.2-201ENST00000503966 1050 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC109811.2-201ENST00000509609 452 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC021820.1-201ENST00000525564 808 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC079598.4-201ENST00000549647 265 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 RBM22P13-201ENST00000569805 1244 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC040174.2-201ENST00000602701 465 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 U1.22-201ENST00000605806 164 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC006946.3-201ENST00000609791 756 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 MAPK10-329ENST00000641555 2656 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 PARP1P1-201ENST00000413631 3026 ntBASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM48Q8IWZ4 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 NBPF25P-201ENST00000606775 2019 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AL138847.1-201ENST00000258651 546 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 SNORA7B-201ENST00000384360 139 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 MTND6P1-201ENST00000417434 424 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 VN1R37P-201ENST00000419096 748 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 OR3B1P-201ENST00000437536 893 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 GCNT1P5-201ENST00000449274 682 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RBM22P5-201ENST00000449536 1277 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 HMGN1P8-201ENST00000463578 288 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RN7SL12P-201ENST00000473849 290 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RN7SL89P-201ENST00000480252 283 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC016550.3-201ENST00000515706 767 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AP001372.4-201ENST00000524889 472 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms