Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RBMY2BP-202ENST00000451071 1156 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
UBE3AQ05086 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
UBE3AQ05086 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
UBE3AQ05086 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.19□□□□□ -1.1
UBE3AQ05086 AC022730.1-201ENST00000473114 568 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 AC095059.2-201ENST00000510601 933 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 MTND6P19-201ENST00000519399 524 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE3AQ05086 FAM30C-201ENST00000561158 410 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 AL034374.2-201ENST00000605281 548 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 AL139123.1-201ENST00000612008 430 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 AC106795.5-201ENST00000623288 454 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
UBE3AQ05086 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
UBE3AQ05086 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE3AQ05086 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
UBE3AQ05086 KYNUP1-201ENST00000466683 1406 ntBASIC8.19□□□□□ -1.1
UBE3AQ05086 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
UBE3AQ05086 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC8.19□□□□□ -1.1
UBE3AQ05086 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.19□□□□□ -1.1
UBE3AQ05086 AP001528.3-201ENST00000624364 3249 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
UBE3AQ05086 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE3AQ05086 PTMAP8-201ENST00000397729 342 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 SNORA11D-201ENST00000408548 128 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 SNORA11E-201ENST00000408778 128 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC127537.1-201ENST00000418183 748 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AF274573.1-201ENST00000430535 494 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC012493.1-201ENST00000453252 760 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC8.18□□□□□ -1.1
UBE3AQ05086 OR7E96P-201ENST00000530816 976 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE3AQ05086 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.18□□□□□ -1.1
UBE3AQ05086 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 MIR3680-2-201ENST00000578247 87 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 FCGR1CP-201ENST00000579737 1127 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 MIR3680-1-201ENST00000581433 87 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 SIGLEC31P-201ENST00000594237 551 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AL591222.2-201ENST00000604443 754 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 MIR6070-201ENST00000613967 103 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AL391903.2-201ENST00000614532 247 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC106782.7-201ENST00000624024 418 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AC133555.5-201ENST00000624430 418 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AC010480.1-201ENST00000624823 684 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
UBE3AQ05086 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 FADS2P1-201ENST00000611807 1446 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
UBE3AQ05086 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
UBE3AQ05086 GC-208ENST00000513476 1567 ntTSL 5 BASIC8.18□□□□□ -1.1
UBE3AQ05086 AC073349.2-201ENST00000427545 1603 ntBASIC8.18□□□□□ -1.1
UBE3AQ05086 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.17□□□□□ -1.1
UBE3AQ05086 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
UBE3AQ05086 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UBE3AQ05086 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms