Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 OR51A10P-201ENST00000307165 937 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 SNORA2C-201ENST00000408564 137 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC130472.1-201ENST00000427885 309 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AL583856.1-201ENST00000454078 1101 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 RPS18P13-201ENST00000461260 454 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 RN7SL332P-201ENST00000482163 254 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AL137802.2-201ENST00000562878 1110 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 CR382285.1-202ENST00000604687 547 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AP004247.4-201ENST00000608484 942 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AL022238.3-201ENST00000609279 443 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 KDM5DP1-201ENST00000622542 298 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 SOCS5P5-201ENST00000402732 1586 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AC007923.2-201ENST00000584218 1591 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
LMO3Q8TAP4 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 RNA5SP448-201ENST00000363151 111 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 SNX18P14-201ENST00000429308 574 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 RPL5P4-201ENST00000434805 886 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC114928.1-201ENST00000446516 415 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC026700.1-201ENST00000512074 544 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AP005597.2-201ENST00000526238 341 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 NUTF2P2-201ENST00000551207 384 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC138749.2-201ENST00000566048 167 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 RN7SL664P-201ENST00000584239 305 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC233280.20-201ENST00000637412 416 ntBASIC8.08□□□□□ -1.12
LMO3Q8TAP4 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms