Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 DPP3P2-201ENST00000416030 1696 ntBASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.72■□□□□ 0.75
DNMT3AQ9Y6K1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 AC020907.5-201ENST00000624372 1936 ntBASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 FAM201B-201ENST00000458407 597 ntBASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 AC008403.3-201ENST00000598924 454 ntBASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.71■□□□□ 0.75
DNMT3AQ9Y6K1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 SOX15-203ENST00000570788 1093 ntBASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 MIR4651-201ENST00000582622 73 ntBASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 AC120498.8-201ENST00000614275 531 ntBASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
DNMT3AQ9Y6K1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 TSPY20P-201ENST00000450910 630 ntBASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 AC008687.6-201ENST00000596318 630 ntBASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DNMT3AQ9Y6K1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 KRT17P3-201ENST00000420566 1262 ntBASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DNMT3AQ9Y6K1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms