Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 AC026396.1-201ENST00000419388 421 ntBASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PTCH2Q9Y6C5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 AL031133.1-201ENST00000406807 723 ntBASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 AC117947.1-201ENST00000427448 529 ntBASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 AC009947.2-201ENST00000444014 672 ntBASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 EGLN1P1-201ENST00000531623 762 ntBASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCH2Q9Y6C5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PTCH2Q9Y6C5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PTCH2Q9Y6C5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCH2Q9Y6C5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 TSPY14P-201ENST00000303979 915 ntBASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCH2Q9Y6C5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 MESTP1-201ENST00000404287 994 ntBASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 DUSP5P1-201ENST00000441325 1139 ntBASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCH2Q9Y6C5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 FAM87A-204ENST00000613235 858 ntBASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.8■■□□□ 1.24
PTCH2Q9Y6C5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms