Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.21■■□□□ 1.15
SCN10AQ9Y5Y9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SCN10AQ9Y5Y9 KRT16P1-201ENST00000399124 1418 ntBASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.2■■□□□ 1.14
SCN10AQ9Y5Y9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 AL049796.1-201ENST00000565336 1766 ntBASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 AC113347.1-201ENST00000413321 391 ntBASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 AC092865.7-201ENST00000641832 219 ntBASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SCN10AQ9Y5Y9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 KSR1P1-201ENST00000446298 240 ntBASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
SCN10AQ9Y5Y9 AL117328.2-201ENST00000624617 1940 ntBASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 AP002982.1-201ENST00000492365 877 ntBASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 C1QL1P1-201ENST00000568105 661 ntBASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SCN10AQ9Y5Y9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 AP000525.1-201ENST00000608286 694 ntBASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 KRT18P35-201ENST00000510488 1269 ntBASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 AL121603.2-201ENST00000557373 2117 ntBASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SCN10AQ9Y5Y9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 FBXW4P1-201ENST00000426721 2239 ntBASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 KRT8P20-201ENST00000423953 1409 ntBASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SCN10AQ9Y5Y9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms