Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 RARRES2P10-201ENST00000564312 460 ntBASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 AC133561.5-201ENST00000635547 218 ntBASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX11Q9Y5W9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 AC087499.1-201ENST00000418141 1075 ntBASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.95■□□□□ 0.78
SNX11Q9Y5W9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 AL355075.4-201ENST00000554988 638 ntBASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.94■□□□□ 0.78
SNX11Q9Y5W9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
SNX11Q9Y5W9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.92■□□□□ 0.78
SNX11Q9Y5W9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms