Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 KRT8P17-201ENST00000453110 1448 ntBASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 AP003097.1-201ENST00000530657 1135 ntBASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CLDN16Q9Y5I7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.59
CLDN16Q9Y5I7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
CLDN16Q9Y5I7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN16Q9Y5I7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 KRT8P20-201ENST00000423953 1409 ntBASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN16Q9Y5I7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 AC120498.8-201ENST00000614275 531 ntBASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN16Q9Y5I7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms