Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 AC011484.1-201ENST00000377652 1995 ntBASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA4Q9Y5G9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 AC007322.3-201ENST00000426526 701 ntBASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 CDV3P1-201ENST00000471403 739 ntBASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 UNC93B4-201ENST00000505679 747 ntBASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA4Q9Y5G9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 AC121338.2-201ENST00000622535 1744 ntBASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 AC026366.1-201ENST00000488803 879 ntBASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA4Q9Y5G9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA4Q9Y5G9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms