Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL049637.2-201ENST00000641778 930 ntBASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 Z98882.1-201ENST00000622160 2253 ntBASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA9Q9Y5G4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AL157384.1-201ENST00000445995 2473 ntBASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AL390719.1-204ENST00000412397 1219 ntBASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 MIR4785-201ENST00000585005 73 ntBASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA9Q9Y5G4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 AF106564.1-201ENST00000607058 2553 ntBASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 MIR1224-201ENST00000408193 85 ntBASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 AL391422.3-201ENST00000603791 2761 ntBASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA9Q9Y5G4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 TSPY7P-201ENST00000431358 1114 ntBASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA9Q9Y5G4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms