Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00588Q9Y4M8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00588Q9Y4M8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00588Q9Y4M8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 MTDHP1-201ENST00000605323 784 ntBASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00588Q9Y4M8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 HLA-G-202ENST00000376815 851 ntBASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 HLA-G-203ENST00000376818 1127 ntBASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 AL023875.1-201ENST00000640777 796 ntBASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00588Q9Y4M8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 AC007375.3-201ENST00000600936 2314 ntBASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 AC239809.2-201ENST00000415381 517 ntBASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00588Q9Y4M8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00588Q9Y4M8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00588Q9Y4M8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00588Q9Y4M8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00588Q9Y4M8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms