Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
SHANK2Q9UPX8 AL121603.2-201ENST00000557373 2117 ntBASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 KRT8P20-201ENST00000423953 1409 ntBASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SHANK2Q9UPX8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SHANK2Q9UPX8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.14■■■□□ 2.41
SHANK2Q9UPX8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.41
SHANK2Q9UPX8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SHANK2Q9UPX8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SHANK2Q9UPX8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 PNN-205ENST00000556530 601 ntTSL 2 BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SHANK2Q9UPX8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 NUDT16P1-203ENST00000513809 620 ntBASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 CD177P1-201ENST00000606252 935 ntBASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 AP003071.4-201ENST00000562276 1284 ntBASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SHANK2Q9UPX8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 HLA-G-202ENST00000376815 851 ntBASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 HLA-G-203ENST00000376818 1127 ntBASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC30.11■■■□□ 2.41
SHANK2Q9UPX8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.1■■■□□ 2.41
SHANK2Q9UPX8 PLK5-205ENST00000642079 1969 ntBASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 NIFKP9-201ENST00000419265 221 ntBASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC30.09■■■□□ 2.41
SHANK2Q9UPX8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 C1QL1P1-201ENST00000568105 661 ntBASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
SHANK2Q9UPX8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms