Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 RARRES2P4-201ENST00000514074 484 ntBASIC19.45■□□□□ 0.7
SNX6Q9UNH7 DUX4L16-201ENST00000555130 1264 ntBASIC19.45■□□□□ 0.7
SNX6Q9UNH7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 AC100791.3-201ENST00000617619 330 ntBASIC19.45■□□□□ 0.7
SNX6Q9UNH7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNX6Q9UNH7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 MCRIP2P1-201ENST00000394346 511 ntBASIC19.44■□□□□ 0.7
SNX6Q9UNH7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 MIR5787-201ENST00000611784 55 ntBASIC19.44■□□□□ 0.7
SNX6Q9UNH7 AC011767.1-201ENST00000617410 1153 ntBASIC19.44■□□□□ 0.7
SNX6Q9UNH7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX6Q9UNH7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.43■□□□□ 0.7
SNX6Q9UNH7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 CNN2P6-201ENST00000439038 900 ntBASIC19.43■□□□□ 0.7
SNX6Q9UNH7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX6Q9UNH7 AC068338.2-201ENST00000563278 1430 ntBASIC19.42■□□□□ 0.7
SNX6Q9UNH7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 BID-214ENST00000617586 542 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.42■□□□□ 0.7
SNX6Q9UNH7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX6Q9UNH7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX6Q9UNH7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms