Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 AL109923.1-201ENST00000618799 583 ntBASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHTF1Q9UMS5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 AC093787.1-201ENST00000450396 207 ntBASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 AC007225.1-201ENST00000566331 1836 ntBASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHTF1Q9UMS5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 TSPY6P-201ENST00000448518 926 ntBASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 AC010980.2-201ENST00000587099 1412 ntBASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 MKRN4P-201ENST00000444706 1521 ntBASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHTF1Q9UMS5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 SLC29A4P1-201ENST00000398760 971 ntBASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 HLA-L-209ENST00000420110 1011 ntBASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 AC104771.1-201ENST00000603335 964 ntBASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF1Q9UMS5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 GUSBP6-202ENST00000438529 1198 ntBASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 AL512408.1-201ENST00000569378 2000 ntBASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF1Q9UMS5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.65■□□□□ 0.9
PHTF1Q9UMS5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms