Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC30.76■■■□□ 2.51
COL17A1Q9UMD9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
COL17A1Q9UMD9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 DGCR10-201ENST00000609839 495 ntBASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 AC004263.2-201ENST00000617183 678 ntBASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL17A1Q9UMD9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 AC005332.1-201ENST00000577698 1310 ntBASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 TSPY21P-201ENST00000433481 731 ntBASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 TSPY23P-201ENST00000440136 739 ntBASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL17A1Q9UMD9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 B3GAT3P1-201ENST00000471720 806 ntBASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 GPALPP1-207ENST00000611650 899 ntBASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 AL691432.3-201ENST00000621860 400 ntBASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.72■■■□□ 2.51
COL17A1Q9UMD9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 AC023632.3-201ENST00000521633 145 ntBASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 AC026271.3-201ENST00000571884 352 ntBASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
COL17A1Q9UMD9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 HMGA1P5-201ENST00000412453 271 ntBASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 FSCN1P1-201ENST00000568912 1481 ntBASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL17A1Q9UMD9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.7■■■□□ 2.5
COL17A1Q9UMD9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 AC011506.1-201ENST00000474329 610 ntBASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 AL031985.4-201ENST00000642138 673 ntBASIC30.69■■■□□ 2.5
COL17A1Q9UMD9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC30.68■■■□□ 2.5
COL17A1Q9UMD9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms