Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 PGM5P4-201ENST00000421970 445 ntBASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 MIR2861-201ENST00000636310 90 ntBASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GTF3C4Q9UKN8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 AC092720.2-201ENST00000602388 1665 ntBASIC21.66■■□□□ 1.06
GTF3C4Q9UKN8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 FAM201B-201ENST00000458407 597 ntBASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GTF3C4Q9UKN8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.64■■□□□ 1.06
GTF3C4Q9UKN8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
GTF3C4Q9UKN8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GTF3C4Q9UKN8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 POU5F1P3-201ENST00000428824 1078 ntBASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 C2orf69P4-201ENST00000565394 541 ntBASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GTF3C4Q9UKN8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 TMEM191A-211ENST00000637163 1067 ntBASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 HLA-B-256ENST00000639848 1089 ntBASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GTF3C4Q9UKN8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms