Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
UBQLN2Q9UHD9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 AC121338.2-201ENST00000622535 1744 ntBASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 AC131281.2-201ENST00000520478 145 ntBASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBQLN2Q9UHD9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 AC018470.1-201ENST00000624790 3129 ntBASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 AL133373.2-201ENST00000623187 2828 ntBASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBQLN2Q9UHD9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 AL136116.3-201ENST00000402907 1138 ntBASIC16.91■□□□□ 0.3
UBQLN2Q9UHD9 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms