Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTSFQ9UBX1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 AC023632.3-201ENST00000521633 145 ntBASIC18.94■□□□□ 0.62
CTSFQ9UBX1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSFQ9UBX1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 PTBP1P-201ENST00000554374 1601 ntBASIC18.93■□□□□ 0.62
CTSFQ9UBX1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 FAM197Y4-202ENST00000622692 608 ntBASIC18.93■□□□□ 0.62
CTSFQ9UBX1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSFQ9UBX1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 AL137060.1-201ENST00000618151 2648 ntBASIC18.92■□□□□ 0.62
CTSFQ9UBX1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 MTDHP1-201ENST00000605323 784 ntBASIC18.92■□□□□ 0.62
CTSFQ9UBX1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSFQ9UBX1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 AC124283.5-201ENST00000624661 1809 ntBASIC18.91■□□□□ 0.62
CTSFQ9UBX1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTSFQ9UBX1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.9■□□□□ 0.62
CTSFQ9UBX1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms