Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC087499.1-201ENST00000418141 1075 ntBASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNMT3BQ9UBC3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 MIR1224-201ENST00000408193 85 ntBASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 AC133561.5-201ENST00000635547 218 ntBASIC21.08■□□□□ 0.97
DNMT3BQ9UBC3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
DNMT3BQ9UBC3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 KRT18P21-201ENST00000515767 1272 ntBASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.07■□□□□ 0.96
DNMT3BQ9UBC3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 HTR7P1-201ENST00000538670 1336 ntBASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 NBPF21P-201ENST00000425093 1451 ntBASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNMT3BQ9UBC3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 KRT16P5-201ENST00000455284 522 ntBASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 AC026471.5-201ENST00000615068 467 ntBASIC21.05■□□□□ 0.96
DNMT3BQ9UBC3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms