Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
LRFN1Q9P244 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN1Q9P244 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN1Q9P244 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
LRFN1Q9P244 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRFN1Q9P244 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AC008550.1-201ENST00000511500 884 ntBASIC18.49■□□□□ 0.55
LRFN1Q9P244 AC023632.3-201ENST00000521633 145 ntBASIC18.49■□□□□ 0.55
LRFN1Q9P244 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRFN1Q9P244 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LRFN1Q9P244 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 MTDHP1-201ENST00000605323 784 ntBASIC18.48■□□□□ 0.55
LRFN1Q9P244 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRFN1Q9P244 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRFN1Q9P244 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 AL023875.1-201ENST00000640777 796 ntBASIC18.47■□□□□ 0.55
LRFN1Q9P244 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
LRFN1Q9P244 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRFN1Q9P244 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 AC026310.3-201ENST00000625186 2373 ntBASIC18.46■□□□□ 0.55
LRFN1Q9P244 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 MIR718-201ENST00000390190 70 ntBASIC18.46■□□□□ 0.55
LRFN1Q9P244 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
LRFN1Q9P244 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRFN1Q9P244 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN1Q9P244 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.45■□□□□ 0.54
LRFN1Q9P244 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRFN1Q9P244 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.45■□□□□ 0.54
LRFN1Q9P244 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms