Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD9Q9P000 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD9Q9P000 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD9Q9P000 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 BX842568.3-201ENST00000418104 571 ntBASIC17.09■□□□□ 0.33
COMMD9Q9P000 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD9Q9P000 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD9Q9P000 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
COMMD9Q9P000 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD9Q9P000 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD9Q9P000 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD9Q9P000 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
COMMD9Q9P000 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COMMD9Q9P000 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD9Q9P000 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD9Q9P000 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
COMMD9Q9P000 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD9Q9P000 TCF3P1-201ENST00000423021 1937 ntBASIC17.08■□□□□ 0.32
COMMD9Q9P000 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SMUG1P1-201ENST00000590640 811 ntBASIC17.07■□□□□ 0.32
COMMD9Q9P000 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD9Q9P000 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD9Q9P000 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms