Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CISHQ9NSE2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CISHQ9NSE2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.47■■□□□ 1.03
CISHQ9NSE2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.47■■□□□ 1.03
CISHQ9NSE2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.47■■□□□ 1.03
CISHQ9NSE2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CISHQ9NSE2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.47■■□□□ 1.03
CISHQ9NSE2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CISHQ9NSE2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.47■■□□□ 1.03
CISHQ9NSE2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 AC023632.3-201ENST00000521633 145 ntBASIC21.46■■□□□ 1.03
CISHQ9NSE2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 AC099778.1-201ENST00000568593 1911 ntBASIC21.46■■□□□ 1.03
CISHQ9NSE2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CISHQ9NSE2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CISHQ9NSE2 KRT8P17-201ENST00000453110 1448 ntBASIC21.46■■□□□ 1.03
CISHQ9NSE2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CISHQ9NSE2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
CISHQ9NSE2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CISHQ9NSE2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 AL031963.3-201ENST00000606441 850 ntBASIC21.45■■□□□ 1.02
CISHQ9NSE2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CISHQ9NSE2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CISHQ9NSE2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CISHQ9NSE2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.44■■□□□ 1.02
CISHQ9NSE2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CISHQ9NSE2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CISHQ9NSE2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CISHQ9NSE2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.43■■□□□ 1.02
CISHQ9NSE2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CISHQ9NSE2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms