Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 DPP3P2-201ENST00000416030 1696 ntBASIC18.68■□□□□ 0.58
POLE3Q9NRF9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLE3Q9NRF9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
POLE3Q9NRF9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 KRT18P68-201ENST00000392293 1000 ntBASIC18.66■□□□□ 0.58
POLE3Q9NRF9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 AC105020.6-201ENST00000621523 1217 ntBASIC18.66■□□□□ 0.58
POLE3Q9NRF9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLE3Q9NRF9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 AL512625.2-201ENST00000417533 625 ntBASIC18.65■□□□□ 0.58
POLE3Q9NRF9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 CYP2T3P-201ENST00000601990 817 ntBASIC18.65■□□□□ 0.58
POLE3Q9NRF9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 SMG8-203ENST00000578922 2178 ntBASIC18.65■□□□□ 0.58
POLE3Q9NRF9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.65■□□□□ 0.58
POLE3Q9NRF9 SLC25A24-204ENST00000569674 2357 ntBASIC18.64■□□□□ 0.58
POLE3Q9NRF9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
POLE3Q9NRF9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.64■□□□□ 0.58
POLE3Q9NRF9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLE3Q9NRF9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
POLE3Q9NRF9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms