Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 MCRIP2P1-201ENST00000394346 511 ntBASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 AC098934.4-201ENST00000564127 592 ntBASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 CYP2T3P-201ENST00000601990 817 ntBASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 KRT17P1-201ENST00000399211 1546 ntBASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NECTIN3Q9NQS3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.22■□□□□ 0.67
NECTIN3Q9NQS3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
NECTIN3Q9NQS3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 KRT18P68-201ENST00000392293 1000 ntBASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms