Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AC137761.2-201ENST00000561729 223 ntBASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AC145350.3-201ENST00000569033 163 ntBASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AL137784.2-201ENST00000607332 1000 ntBASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HINT3Q9NQE9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HINT3Q9NQE9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.14■□□□□ 0.5
HINT3Q9NQE9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
HINT3Q9NQE9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.14■□□□□ 0.49
HINT3Q9NQE9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HINT3Q9NQE9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 BX119927.1-201ENST00000636596 1552 ntBASIC18.13■□□□□ 0.49
HINT3Q9NQE9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 AC016769.1-201ENST00000409132 1010 ntBASIC18.13■□□□□ 0.49
HINT3Q9NQE9 AC007322.3-201ENST00000426526 701 ntBASIC18.13■□□□□ 0.49
HINT3Q9NQE9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 AC243732.1-201ENST00000612648 864 ntBASIC18.13■□□□□ 0.49
HINT3Q9NQE9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 RBM17P2-201ENST00000616397 1405 ntBASIC18.13■□□□□ 0.49
HINT3Q9NQE9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.13■□□□□ 0.49
HINT3Q9NQE9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 KRT18P20-201ENST00000548986 1279 ntBASIC18.12■□□□□ 0.49
HINT3Q9NQE9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.12■□□□□ 0.49
HINT3Q9NQE9 TMEM179-206ENST00000616017 1645 ntBASIC18.12■□□□□ 0.49
HINT3Q9NQE9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HINT3Q9NQE9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.1■□□□□ 0.49
HINT3Q9NQE9 AC018445.3-201ENST00000624177 1945 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms