Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 BX842568.3-201ENST00000418104 571 ntBASIC17.29■□□□□ 0.36
IFT46Q9NQC8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 AC126544.1-201ENST00000580842 1059 ntBASIC17.29■□□□□ 0.36
IFT46Q9NQC8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT46Q9NQC8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 AC133561.4-201ENST00000566112 224 ntBASIC17.28■□□□□ 0.36
IFT46Q9NQC8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT46Q9NQC8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 GUSBP5-201ENST00000418136 578 ntBASIC17.27■□□□□ 0.36
IFT46Q9NQC8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT46Q9NQC8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT46Q9NQC8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 IGHV3-19-201ENST00000521488 291 ntBASIC17.26■□□□□ 0.35
IFT46Q9NQC8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT46Q9NQC8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms