Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 AC133561.4-201ENST00000566112 224 ntBASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.45□□□□□ -0.26
SND1-IT1Q9HBX3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 OR6D1P-202ENST00000641007 5290 ntBASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 BX842568.3-201ENST00000418104 571 ntBASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SND1-IT1Q9HBX3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.43□□□□□ -0.26
SND1-IT1Q9HBX3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms