Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.19■□□□□ 0.82
VPS11Q9H270 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
VPS11Q9H270 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.19■□□□□ 0.82
VPS11Q9H270 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.19■□□□□ 0.82
VPS11Q9H270 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.19■□□□□ 0.82
VPS11Q9H270 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VPS11Q9H270 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
VPS11Q9H270 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VPS11Q9H270 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VPS11Q9H270 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VPS11Q9H270 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.18■□□□□ 0.82
VPS11Q9H270 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
VPS11Q9H270 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.18■□□□□ 0.82
VPS11Q9H270 CCDC92B-201ENST00000575506 885 ntBASIC20.18■□□□□ 0.82
VPS11Q9H270 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.18■□□□□ 0.82
VPS11Q9H270 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.18■□□□□ 0.82
VPS11Q9H270 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.18■□□□□ 0.82
VPS11Q9H270 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
VPS11Q9H270 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VPS11Q9H270 AP000974.1-201ENST00000623909 2387 ntBASIC20.17■□□□□ 0.82
VPS11Q9H270 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.17■□□□□ 0.82
VPS11Q9H270 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.17■□□□□ 0.82
VPS11Q9H270 TERF1P2-201ENST00000583350 1212 ntBASIC20.17■□□□□ 0.82
VPS11Q9H270 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.17■□□□□ 0.82
VPS11Q9H270 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.17■□□□□ 0.82
VPS11Q9H270 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VPS11Q9H270 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
VPS11Q9H270 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.17■□□□□ 0.82
VPS11Q9H270 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VPS11Q9H270 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VPS11Q9H270 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.16■□□□□ 0.82
VPS11Q9H270 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VPS11Q9H270 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 AC091799.1-201ENST00000422823 811 ntBASIC20.16■□□□□ 0.82
VPS11Q9H270 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.16■□□□□ 0.82
VPS11Q9H270 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.16■□□□□ 0.82
VPS11Q9H270 KRT18P20-201ENST00000548986 1279 ntBASIC20.16■□□□□ 0.82
VPS11Q9H270 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.16■□□□□ 0.82
VPS11Q9H270 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.16■□□□□ 0.82
VPS11Q9H270 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 TMEM179-206ENST00000616017 1645 ntBASIC20.16■□□□□ 0.82
VPS11Q9H270 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VPS11Q9H270 AC005332.7-201ENST00000614046 2005 ntBASIC20.15■□□□□ 0.82
VPS11Q9H270 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.15■□□□□ 0.82
VPS11Q9H270 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
VPS11Q9H270 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.15■□□□□ 0.82
VPS11Q9H270 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VPS11Q9H270 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VPS11Q9H270 AC007322.3-201ENST00000426526 701 ntBASIC20.15■□□□□ 0.82
VPS11Q9H270 AC123595.1-201ENST00000440769 1046 ntBASIC20.15■□□□□ 0.82
VPS11Q9H270 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.15■□□□□ 0.82
VPS11Q9H270 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
VPS11Q9H270 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms