Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR2J3Q9H1A7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 AC087289.5-201ENST00000586076 3175 ntBASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 AL162412.1-201ENST00000567129 965 ntBASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 MYCNOS-205ENST00000641950 531 ntBASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR2J3Q9H1A7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 UBE2DNL-204ENST00000602536 740 ntBASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
POLR2J3Q9H1A7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 AC087633.2-202ENST00000565166 1439 ntBASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
POLR2J3Q9H1A7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
POLR2J3Q9H1A7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
POLR2J3Q9H1A7 AC116562.4-201ENST00000641316 2276 ntBASIC18.52■□□□□ 0.55
POLR2J3Q9H1A7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms