Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.95■□□□□ 0.3
ALX4Q9H161 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.95■□□□□ 0.3
ALX4Q9H161 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX4Q9H161 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX4Q9H161 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 IRS3P-201ENST00000223076 1006 ntBASIC16.94■□□□□ 0.3
ALX4Q9H161 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX4Q9H161 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ALX4Q9H161 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX4Q9H161 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ALX4Q9H161 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX4Q9H161 AL691432.2-201ENST00000607222 2038 ntBASIC16.93■□□□□ 0.3
ALX4Q9H161 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX4Q9H161 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
ALX4Q9H161 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.93■□□□□ 0.3
ALX4Q9H161 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX4Q9H161 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX4Q9H161 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.92■□□□□ 0.3
ALX4Q9H161 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 AC079598.2-202ENST00000546624 1451 ntBASIC16.92■□□□□ 0.3
ALX4Q9H161 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALX4Q9H161 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX4Q9H161 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX4Q9H161 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ALX4Q9H161 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.91■□□□□ 0.3
ALX4Q9H161 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.91■□□□□ 0.3
ALX4Q9H161 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.91■□□□□ 0.3
ALX4Q9H161 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
ALX4Q9H161 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.91■□□□□ 0.3
ALX4Q9H161 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.91■□□□□ 0.3
ALX4Q9H161 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.91■□□□□ 0.3
ALX4Q9H161 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX4Q9H161 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms