Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.71■□□□□ 0.43
SLIRPQ9GZT3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.71■□□□□ 0.43
SLIRPQ9GZT3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLIRPQ9GZT3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 MIR3181-201ENST00000578512 73 ntBASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 AC092028.1-203ENST00000608262 953 ntBASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLIRPQ9GZT3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
SLIRPQ9GZT3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLIRPQ9GZT3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLIRPQ9GZT3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms