Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 Z92544.1-202ENST00000571933 1220 ntBASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC092720.2-201ENST00000602388 1665 ntBASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC5.43□□□□□ -1.54
LCE3DQ9BYE3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 MIR4508-201ENST00000584178 70 ntBASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 AL451085.2-201ENST00000605085 799 ntBASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LCE3DQ9BYE3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms