Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 AC010141.2-201ENST00000452426 721 ntBASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 SUDS3P1-201ENST00000505831 966 ntBASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 AL158211.5-201ENST00000623583 2518 ntBASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMSS1Q9BQ75 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.12■□□□□ 0.33
CMSS1Q9BQ75 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 HCG11-201ENST00000411553 5696 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L2-201ENST00000561772 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L6-201ENST00000626483 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L1-201ENST00000627662 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L8-201ENST00000629013 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L3-201ENST00000630187 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L7-201ENST00000630678 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 DUX4L5-201ENST00000630834 1275 ntBASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMSS1Q9BQ75 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMSS1Q9BQ75 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms