Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP1Q96SZ6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 AC007375.3-201ENST00000600936 2314 ntBASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CDK5RAP1Q96SZ6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 KRT8P17-201ENST00000453110 1448 ntBASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 GCSHP5-201ENST00000443090 522 ntBASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 RN7SL471P-201ENST00000580476 299 ntBASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5RAP1Q96SZ6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDK5RAP1Q96SZ6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 AC098590.1-201ENST00000468126 897 ntBASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 AC142381.4-202ENST00000563973 229 ntBASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 DPP3P2-201ENST00000416030 1696 ntBASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP1Q96SZ6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP1Q96SZ6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP1Q96SZ6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms