Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 AC005181.1-201ENST00000604782 1256 ntBASIC19.06■□□□□ 0.64
BBS4Q96RK4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 OR10C1-204ENST00000622521 1039 ntBASIC19.05■□□□□ 0.64
BBS4Q96RK4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BBS4Q96RK4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.05■□□□□ 0.64
BBS4Q96RK4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.04■□□□□ 0.64
BBS4Q96RK4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
BBS4Q96RK4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 KRT18P68-201ENST00000392293 1000 ntBASIC19.04■□□□□ 0.64
BBS4Q96RK4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.04■□□□□ 0.64
BBS4Q96RK4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.04■□□□□ 0.64
BBS4Q96RK4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 SLC25A24-204ENST00000569674 2357 ntBASIC19.04■□□□□ 0.64
BBS4Q96RK4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BBS4Q96RK4 AC099778.1-201ENST00000568593 1911 ntBASIC19.04■□□□□ 0.64
BBS4Q96RK4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
BBS4Q96RK4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.03■□□□□ 0.64
BBS4Q96RK4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 AC073111.5-205ENST00000641717 521 ntBASIC19.03■□□□□ 0.64
BBS4Q96RK4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.03■□□□□ 0.64
BBS4Q96RK4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BBS4Q96RK4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.02■□□□□ 0.64
BBS4Q96RK4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BBS4Q96RK4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms