Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRC39Q96DD0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRC39Q96DD0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 AL158211.5-201ENST00000623583 2518 ntBASIC20.3■□□□□ 0.84
LRRC39Q96DD0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.3■□□□□ 0.84
LRRC39Q96DD0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LRRC39Q96DD0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 KRT18P11-201ENST00000435214 1283 ntBASIC20.29■□□□□ 0.84
LRRC39Q96DD0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 AC013268.1-206ENST00000638368 961 ntBASIC20.29■□□□□ 0.84
LRRC39Q96DD0 AC112229.1-201ENST00000639295 961 ntBASIC20.29■□□□□ 0.84
LRRC39Q96DD0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC39Q96DD0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.28■□□□□ 0.84
LRRC39Q96DD0 NTF6G-201ENST00000591094 616 ntBASIC20.28■□□□□ 0.84
LRRC39Q96DD0 AC100791.3-201ENST00000617619 330 ntBASIC20.28■□□□□ 0.84
LRRC39Q96DD0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 AC116562.4-201ENST00000641316 2276 ntBASIC20.28■□□□□ 0.84
LRRC39Q96DD0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC39Q96DD0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC39Q96DD0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
LRRC39Q96DD0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC39Q96DD0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC39Q96DD0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms